|
|
Application of loop-mediated isothermal amplification in detection of lower respiratory tract pathogens in patients with mechanical ventilation#br# |
LIU Jiajia SUN Jingna YAN Haiyang HAN Zhengang CHEN Jing ZHAO Shuai▲ |
Laboratory Center, the First Hospital of Hebei Medical University, Hebei Province, Shijiazhuang 050031, China |
|
|
Abstract Objective To explore the application of loop-mediated isothermal amplification in the detection of lower respiratory tract pathogens in patients with mechanical ventilation. Methods From January to June 2021, a total of 90 patients with lower respiratory tract infection who were newly transferred to the Department of Respiratory Medicine and the Intensive Care Unit of the First Hospital of Hebei Medical University and underwent mechanical ventilation combined with ventilation through tracheal intubation were collected for bronchoalveolar lavage fluid samples for bacterial culture and drug sensitivity identification. At the same time, the loop-mediated isothermal amplification was used to detect the nucleic acid of pathogenic bacteria, and the samples of pathogenic bacteria were detected by drug resistance gene chip to analyze the detection of pathogens and drug resistance genes in patients. Results A total of 90 specimens were tested, among which 69 specimens were positive by the loop-mediated isothermal amplification, with a positive rate of 76.67%, and 31 were positive by bacterial culture, with a positive rate of 34.44%. The positive detection rate of the loop-mediated isothermal amplification was significantly higher than that of the bacterial culture method. The drug resistance test was carried out on the positive strains. Taking each sample as a separate whole, the loop-mediated isothermal amplification had a high detection rate in the detection of mecA, OXA-48, OXA-23, and other drug resistance genes, and was consistent with the detection rate of drug resistance genes. The compliance rate of the “gold standard” for drug resistance detection was high. Conclusion The detection rate of pathogens and drug resistance genes by the loop-mediated isothermal amplification is higher than that of traditional bacterial culture and drug susceptibility tests, and the detection rate of drug resistance genes is high, which has a good application prospect for guiding clinical medication.
|
|
|
|
|
[1] 林牧,周开元,韩晓静,等.环介导恒温扩增技术在下呼吸道病原菌检测的应用[J].现代医药卫生,2019,35(2):270-272.
[2] 司玉莹,赵望,叶蓓,等.环介导等温扩增技术检测呼吸道样本中肺炎克雷伯菌[J].临床检验杂志,2020,38(1):62-65,71.
[3] Suwannin P,Polpanich D,Leelayoova S,et al. Heat-enhancing aggregation of gold nanoparticles combined with loop-mediated isothermal amplification (HAG-LAMP) for Plasmodium falciparum detection [J]. J Pharm Biomed Anal,2021,27(203):114178.
[4] 陈炎城,朱旭华,曾汉华.LAMP十三联检在重症肺炎病原菌检测中的应用价值[J].中国医学创新,2019,16(17):165-169.
[5] 杨家树,戚丽华,吴方.微流控LAMP技术在呼吸道病原体检测中的临床应用进展[J].国际检验医学杂志,2020, 41(13):1645-1648.
[6] 章国平,白正强,王红洲,等.兰州地区儿童呼吸道感染病原体分布情况和快速检测[J].中国保健营养,2019,29(22):14-15.
[7] 杨雪飞,彭攀,焦长锁,等.环介导等温扩增检测在下呼吸道感染病原菌检查中应用价值[J].实用预防医学,2019,26(6):759-761.
[8] 陶峰,顾超,张齐.环介导等温扩增技术联合结核分枝杆菌快速培养在涂阴肺结核中的诊断价值[J].中国现代医生,2017,55(5):19-22.
[9] 严春霞,陆伟宏,何国产,等.环介导等温扩增在检测肺炎支原体中的临床应用[J].中国医学科学院学报,2019, 41(2):203-207.
[10] Nakiyingi L,Nakanwagi P,Briggs J,et al. Performance of loop-mediated isothermal amplification assay in the diagnosis of pulmonary tuberculosis in a high prevalence TB/HIV rural setting in Uganda [J]. BMC Infect Dis,2018, 18(1):87.
[11] Mitsuko S,Kilgore PE,Jin KE,et al. Loop-Mediated Isothermal Amplification Methods for Diagnosis of Bacterial Meningitis [J]. Front Pediatr,2018,6:57.
[12] Ahuja A,Joshi V,Singh G,et al. Rapid and sensitive detection of potato cyst nematode Globodera rostochiensis by loop-mediated isothermal amplification assay [J]. 3 Biotech,2021,11(6):1-8.
[13] Jain S,Williams DJ,Arnold SR,et al. Community-acquired pneumonia requiring hospitalization among U.S. children [J]. New Engl J Med,2015,372(9):835.
[14] 王鸿,刘权贤,陈玲,等.LAMP法在临床诊断的肺结核患者BALF标本中的应用评价[J].国际检验医学杂志,2019,40(7):21-24.
[15] But WC,Wu HY,Shao KT,et al. Rapid detection of CITES-listed shark fin species by loop-mediated isothermal amplification assay with potential for field use [J]. Sci Rep,2020,10(1):4455.
[16] Sedaghatjoo S,Forster MK,Niessen L,et al. Development of a loop-mediated isothermal amplification assay for the detection of Tilletia controversa based on genome comparison [J]. Sci Rep,2021,11(1):11611.
[17] 李美,陈飘飘,应斌武.基于环介导等温扩增技术的即时检测在检验医学中的应用[J].中华检验医学杂志,2021,44(9):776-780.
[18] 李欢,徐秋月,王云娟,等.利用逆转录环介导恒温扩增技术建立新型冠状病毒核酸快速检测方法[J].昆明医科大学学报,2021,42(9):25-31.
[19] 徐匆,罗华建,李艳芳,等.环介导等温扩增技术的应用及研究进展[J].广东农业科学,2019,46(4):116-123.
[20] 陈艳玲.环介导等温扩增技术在快速病原菌检测中的价值[J].实用检验医师杂志,2019,11(3):131-133.
[21] Han R,Shi Q,Wu S,et al. Dissemination of Carbapenemases (KPC,NDM,OXA-48,IMP,and VIM) Among Carbapenem-Resistant Enterobacteriaceae Isolated From Adult and Children Patients in China [J]. Front Cell Infect Mi,2020,10:314.
[22] Hong L,Li JY,Lv JP,et al. Development and evaluation of a loop-mediated isothermal amplification assay for clinical diagnosis of respiratory human adenoviruses emergent in China [J]. Diagn Microbiol Infect Dis,2021, 101(1):115401.
[23] Kheirandish F,Fallahi S,Mahmoudvand H,et al. A loop-mediated isothermal amplification (LAMP) assay for detection of Toxoplasma gondii infection in women with spontaneous abortion [J]. Arch Microbiol,2021,203(2):1-7.
[24] 熊林利,晏静.2016-2018年重庆市某医院重症监护室鲍曼不动杆菌耐药情况分析[J].华南预防医学,2020, 46(2):95-97.
[25] Xie C,Chen S,Zhang L,et al. Multiplex detection of blood-borne pathogens on a self-driven microfluidic chip using loop-mediated isothermal amplification [J]. Anal Bioanal Chem,2021,413(11):2923-2931.
[26] 王咏红,郭雅洁,陈玉莹,等.恒温扩增芯片法在儿童下呼吸道感染性疾病中的应用价值评估[J].中国循证儿科杂志,2018,13(3):21-24. |
|
|
|